TY - JOUR
T1 - Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria
AU - D'Agostino, Paul M. D.
AU - Woodhouse, Jason N.
AU - Makower, A. Katharina
AU - Yeung, Anna C. Y.
AU - Ongley, Sarah E.
AU - Micallef, Melinda L.
AU - Moffitt, Michelle C.
AU - Neilan, Brett A.
N1 - Publisher Copyright:
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.
PY - 2016/2/1
Y1 - 2016/2/1
N2 - A common misconception persists that the genomes of toxic and non-toxic cyanobacterial strains are largely conserved with the exception of the presence or absence of the genes responsible for toxin production. Implementation of -omics era technologies has challenged this paradigm, with comparative analyses providing increased insight into the differences between strains of the same species. The implementation of genomic, transcriptomic and proteomic approaches has revealed distinct profiles between toxin-producing and non-toxic strains. Further, metagenomics and metaproteomics highlight the genomic potential and functional state of toxic bloom events over time. In this review, we highlight how these technologies have shaped our understanding of the complex relationship between these molecules, their producers and the environment at large within which they persist.
AB - A common misconception persists that the genomes of toxic and non-toxic cyanobacterial strains are largely conserved with the exception of the presence or absence of the genes responsible for toxin production. Implementation of -omics era technologies has challenged this paradigm, with comparative analyses providing increased insight into the differences between strains of the same species. The implementation of genomic, transcriptomic and proteomic approaches has revealed distinct profiles between toxin-producing and non-toxic strains. Further, metagenomics and metaproteomics highlight the genomic potential and functional state of toxic bloom events over time. In this review, we highlight how these technologies have shaped our understanding of the complex relationship between these molecules, their producers and the environment at large within which they persist.
KW - cyanobacteria
KW - cyanobacterial toxins
KW - genomics
KW - proteomics
UR - http://handle.uws.edu.au:8081/1959.7/uws:33401
U2 - 10.1111/1758-2229.12366
DO - 10.1111/1758-2229.12366
M3 - Article
SN - 1758-2229
VL - 8
SP - 3
EP - 13
JO - Environmental Microbiology Reports
JF - Environmental Microbiology Reports
IS - 1
ER -