Isolation and characterization of microsatellite markers for the neotropical tree, Pachira quinata (Malvaceae)

Paul D. Rymer; Stephen Harris; David Boshier

doi:10.1007/s12686-013-0097-0

Isolation and characterization of microsatellite markers for the neotropical tree, Pachira quinata (Malvaceae)

Paul D. Rymer, Stephen Harris, David Boshier

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Abstract

Twelve microsatellite loci were developed from a genomic library enriched for SSRs of Pachira quniata, a canopy tree species of dry and some humid forests in the neotropics (Central and northern South America). Genotyping of 30 trees from one population on the Pacific coast of Nicaragua was successfully performed. The loci were across amplified in related species. These microsatellites will be used to compare regional population structuring and mating patterns in fragmented landscapes.

Original language	English
Pages (from-to)	375-382
Number of pages	8
Journal	Conservation Genetics Resources
Volume	6
Issue number	2
DOIs	https://doi.org/10.1007/s12686-013-0097-0
Publication status	Published - 2014

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abstract = "Twelve microsatellite loci were developed from a genomic library enriched for SSRs of Pachira quniata, a canopy tree species of dry and some humid forests in the neotropics (Central and northern South America). Genotyping of 30 trees from one population on the Pacific coast of Nicaragua was successfully performed. The loci were across amplified in related species. These microsatellites will be used to compare regional population structuring and mating patterns in fragmented landscapes.",

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AU - Rymer, Paul D.

AU - Harris, Stephen

AU - Boshier, David

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N2 - Twelve microsatellite loci were developed from a genomic library enriched for SSRs of Pachira quniata, a canopy tree species of dry and some humid forests in the neotropics (Central and northern South America). Genotyping of 30 trees from one population on the Pacific coast of Nicaragua was successfully performed. The loci were across amplified in related species. These microsatellites will be used to compare regional population structuring and mating patterns in fragmented landscapes.

AB - Twelve microsatellite loci were developed from a genomic library enriched for SSRs of Pachira quniata, a canopy tree species of dry and some humid forests in the neotropics (Central and northern South America). Genotyping of 30 trees from one population on the Pacific coast of Nicaragua was successfully performed. The loci were across amplified in related species. These microsatellites will be used to compare regional population structuring and mating patterns in fragmented landscapes.

UR - http://handle.uws.edu.au:8081/1959.7/547422

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DO - 10.1007/s12686-013-0097-0

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JO - Conservation Genetics Resources

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IS - 2

ER -

Isolation and characterization of microsatellite markers for the neotropical tree, Pachira quinata (Malvaceae)

Abstract

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