Resolving phylogenetic and taxonomic conflict in Begonia

null Bergonia Phylogeny Group; W. H. Ardi; L. Campos-Domínguez; K. -F. Chung; W. -K. Dong; Eleanor Drinkwater; D. Fuller; J. Gagul; G. J. L. Garnett; D. Girmansyah; W. P. Goodall-Copestake; M. Hughes; E. L. Jacques; O. A. Jara-Muñoz; S. Julia; C. A. Kidner; R. Kiew; N. Krishna; R. Li; L. D. K. Marasinghe; M. B. Maw; C. W. Lin; P. W. Moonlight; H. T. Nguyen; H. Q. Nguyen; T. Phutthai; A. K. Pradeep; S. Rajbhandary; R. R. Rubite; D. Scherberich; K. Souvannakhoummane; M. Sreenath; M. C. Tebbitt; D. C. Thomas; D. Tian; Y. -H. Tseng; H. P. Wilson

doi:10.24823/ejb.2022.1928

Resolving phylogenetic and taxonomic conflict in Begonia

Bergonia Phylogeny Group, W. H. Ardi, L. Campos-Domínguez, K. -F. Chung, W. -K. Dong, Eleanor Drinkwater, D. Fuller, J. Gagul, G. J. L. Garnett, D. Girmansyah, W. P. Goodall-Copestake, M. Hughes, E. L. Jacques, O. A. Jara-Muñoz, S. Julia, C. A. Kidner, R. Kiew, N. Krishna, R. Li, L. D. K. MarasingheM. B. Maw, C. W. Lin, P. W. Moonlight, H. T. Nguyen, H. Q. Nguyen, T. Phutthai, A. K. Pradeep, S. Rajbhandary, R. R. Rubite, D. Scherberich, K. Souvannakhoummane, M. Sreenath, M. C. Tebbitt, D. C. Thomas, D. Tian, Y. -H. Tseng, H. P. Wilson

Western Sydney University

Research output: Contribution to journal › Article › peer-review

9 Citations (Scopus)

Abstract

Begonia is the world's fastest-growing genus and a focus of intense taxonomic research. To support this, a stable and useful sectional classification is needed. This paper reviews the feasibility and challenges of creating an infrageneric classification for Begonia based on phylogenetic data, and how to overcome phylogenetic and taxonomic conflict. In particular, it (i) tests genus-wide patterns of incongruence between phylogenies based on the nuclear, chloroplast and mitochondrial genomes; (ii) explains organelle inheritance and its contribution to phylogenetic incongruence, and (iii) presents a manifesto for a workable and stable subgeneric classification in light of the above and lays the foundation for a collaborative Begonia Phylogeny Group.

Original language	English
Article number	1928
Pages (from-to)	1-28
Number of pages	28
Journal	Edingburgh Journal of Botany
Volume	79
DOIs	https://doi.org/10.24823/ejb.2022.1928
Publication status	Published - 2022

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This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/).

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Bergonia Phylogeny Group, Ardi, W. H., Campos-Domínguez, L., Chung, K. .-F., Dong, W. .-K., Drinkwater, E., Fuller, D., Gagul, J., Garnett, G. J. L., Girmansyah, D., Goodall-Copestake, W. P., Hughes, M., Jacques, E. L., Jara-Muñoz, O. A., Julia, S., Kidner, C. A., Kiew, R., Krishna, N., Li, R., ... Wilson, H. P. (2022). Resolving phylogenetic and taxonomic conflict in Begonia. Edingburgh Journal of Botany, 79, 1-28. Article 1928. https://doi.org/10.24823/ejb.2022.1928

@article{b812471397dc43a696314b445dbe23da,

title = "Resolving phylogenetic and taxonomic conflict in Begonia",

abstract = "Begonia is the world's fastest-growing genus and a focus of intense taxonomic research. To support this, a stable and useful sectional classification is needed. This paper reviews the feasibility and challenges of creating an infrageneric classification for Begonia based on phylogenetic data, and how to overcome phylogenetic and taxonomic conflict. In particular, it (i) tests genus-wide patterns of incongruence between phylogenies based on the nuclear, chloroplast and mitochondrial genomes; (ii) explains organelle inheritance and its contribution to phylogenetic incongruence, and (iii) presents a manifesto for a workable and stable subgeneric classification in light of the above and lays the foundation for a collaborative Begonia Phylogeny Group.",

author = "{Bergonia Phylogeny Group} and Ardi, {W. H.} and L. Campos-Dom{\'i}nguez and Chung, {K. -F.} and Dong, {W. -K.} and Eleanor Drinkwater and D. Fuller and J. Gagul and Garnett, {G. J. L.} and D. Girmansyah and Goodall-Copestake, {W. P.} and M. Hughes and Jacques, {E. L.} and Jara-Mu{\~n}oz, {O. A.} and S. Julia and Kidner, {C. A.} and R. Kiew and N. Krishna and R. Li and Marasinghe, {L. D. K.} and Maw, {M. B.} and Lin, {C. W.} and Moonlight, {P. W.} and Nguyen, {H. T.} and Nguyen, {H. Q.} and T. Phutthai and Pradeep, {A. K.} and S. Rajbhandary and Rubite, {R. R.} and D. Scherberich and K. Souvannakhoummane and M. Sreenath and Tebbitt, {M. C.} and Thomas, {D. C.} and D. Tian and Tseng, {Y. -H.} and Wilson, {H. P.}",

year = "2022",

doi = "10.24823/ejb.2022.1928",

language = "English",

volume = "79",

pages = "1--28",

journal = "Edingburgh Journal of Botany",

issn = "0960-4286",

publisher = "Royal Botanic Garden Edinburgh",

}

Bergonia Phylogeny Group, Ardi, WH, Campos-Domínguez, L, Chung, K-F, Dong, W-K, Drinkwater, E, Fuller, D, Gagul, J, Garnett, GJL, Girmansyah, D, Goodall-Copestake, WP, Hughes, M, Jacques, EL, Jara-Muñoz, OA, Julia, S, Kidner, CA, Kiew, R, Krishna, N, Li, R, Marasinghe, LDK, Maw, MB, Lin, CW, Moonlight, PW, Nguyen, HT, Nguyen, HQ, Phutthai, T, Pradeep, AK, Rajbhandary, S, Rubite, RR, Scherberich, D, Souvannakhoummane, K, Sreenath, M, Tebbitt, MC, Thomas, DC, Tian, D, Tseng, Y-H & Wilson, HP 2022, 'Resolving phylogenetic and taxonomic conflict in Begonia', Edingburgh Journal of Botany, vol. 79, 1928, pp. 1-28. https://doi.org/10.24823/ejb.2022.1928

TY - JOUR

T1 - Resolving phylogenetic and taxonomic conflict in Begonia

AU - Bergonia Phylogeny Group, null

AU - Ardi, W. H.

AU - Campos-Domínguez, L.

AU - Chung, K. -F.

AU - Dong, W. -K.

AU - Drinkwater, Eleanor

AU - Fuller, D.

AU - Gagul, J.

AU - Garnett, G. J. L.

AU - Girmansyah, D.

AU - Goodall-Copestake, W. P.

AU - Hughes, M.

AU - Jacques, E. L.

AU - Jara-Muñoz, O. A.

AU - Julia, S.

AU - Kidner, C. A.

AU - Kiew, R.

AU - Krishna, N.

AU - Li, R.

AU - Marasinghe, L. D. K.

AU - Maw, M. B.

AU - Lin, C. W.

AU - Moonlight, P. W.

AU - Nguyen, H. T.

AU - Nguyen, H. Q.

AU - Phutthai, T.

AU - Pradeep, A. K.

AU - Rajbhandary, S.

AU - Rubite, R. R.

AU - Scherberich, D.

AU - Souvannakhoummane, K.

AU - Sreenath, M.

AU - Tebbitt, M. C.

AU - Thomas, D. C.

AU - Tian, D.

AU - Tseng, Y. -H.

AU - Wilson, H. P.

PY - 2022

Y1 - 2022

N2 - Begonia is the world's fastest-growing genus and a focus of intense taxonomic research. To support this, a stable and useful sectional classification is needed. This paper reviews the feasibility and challenges of creating an infrageneric classification for Begonia based on phylogenetic data, and how to overcome phylogenetic and taxonomic conflict. In particular, it (i) tests genus-wide patterns of incongruence between phylogenies based on the nuclear, chloroplast and mitochondrial genomes; (ii) explains organelle inheritance and its contribution to phylogenetic incongruence, and (iii) presents a manifesto for a workable and stable subgeneric classification in light of the above and lays the foundation for a collaborative Begonia Phylogeny Group.

AB - Begonia is the world's fastest-growing genus and a focus of intense taxonomic research. To support this, a stable and useful sectional classification is needed. This paper reviews the feasibility and challenges of creating an infrageneric classification for Begonia based on phylogenetic data, and how to overcome phylogenetic and taxonomic conflict. In particular, it (i) tests genus-wide patterns of incongruence between phylogenies based on the nuclear, chloroplast and mitochondrial genomes; (ii) explains organelle inheritance and its contribution to phylogenetic incongruence, and (iii) presents a manifesto for a workable and stable subgeneric classification in light of the above and lays the foundation for a collaborative Begonia Phylogeny Group.

UR - https://hdl.handle.net/1959.7/uws:76994

UR - http://www.scopus.com/inward/record.url?scp=85167611250&partnerID=8YFLogxK

U2 - 10.24823/ejb.2022.1928

DO - 10.24823/ejb.2022.1928

M3 - Article

SN - 0960-4286

VL - 79

SP - 1

EP - 28

JO - Edingburgh Journal of Botany

JF - Edingburgh Journal of Botany

M1 - 1928

ER -

Resolving phylogenetic and taxonomic conflict in Begonia

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